Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
Acry_2006Conserved hypothetical protein. (287 aa)    
Predicted Functional Partners:
Acry_2007
PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase.
  
 0.980
Acry_2005
TIGRFAM: conserved hypothetical membrane protein.
 
    0.958
Acry_2004
Hypothetical protein.
 
     0.956
Acry_0743
Hypothetical protein.
  
   
 0.768
Acry_2008
PFAM: protein of unknown function DUF1285.
 
     0.737
Acry_2009
PFAM: NUDIX hydrolase.
       0.652
Acry_2010
PFAM: Polynucleotide adenylyltransferase region; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
 
     0.581
Acry_2662
SMART: Tetratricopeptide domain protein.
 
  
 0.527
Acry_1060
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
  
  
 0.488
Acry_0021
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein.
  
     0.429
Your Current Organism:
Acidiphilium cryptum
NCBI taxonomy Id: 349163
Other names: A. cryptum JF-5, Acidiphilium cryptum JF-5, Acidiphilium cryptum str. JF-5, Acidiphilium cryptum strain JF-5, Acidiphilum cryptum JF-5
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