STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acry_2016PFAM: type II secretion system protein. (307 aa)    
Predicted Functional Partners:
Acry_2017
PFAM: type II secretion system protein.
 
  
 0.995
Acry_2020
PFAM: SAF domain.
 
  
 0.991
Acry_2018
PFAM: type II secretion system protein E.
 
  
 0.988
Acry_2019
Flp pilus assembly protein ATPase CpaE-like protein.
 
  
 0.984
Acry_0820
Response regulator receiver protein.
 
  
 0.933
Acry_0481
PFAM: type II and III secretion system protein; Belongs to the bacterial secretin family.
 
  
 0.893
Acry_0107
Flagellar biosynthesis regulator FlbT-like protein.
   
    0.739
Acry_2021
PFAM: Flp/Fap pilin component.
  
  
 0.688
Acry_0105
PFAM: protein of unknown function DUF1217.
   
    0.671
Acry_2979
PFAM: TadE family protein.
 
    0.637
Your Current Organism:
Acidiphilium cryptum
NCBI taxonomy Id: 349163
Other names: A. cryptum JF-5, Acidiphilium cryptum JF-5, Acidiphilium cryptum str. JF-5, Acidiphilium cryptum strain JF-5, Acidiphilum cryptum JF-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.