Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Acry_2091Uncharacterized protein-like protein. (156 aa)    
Predicted Functional Partners:
Acry_2089
PFAM: OmpA/MotB domain protein.
 
  
 0.992
Acry_2090
PFAM: protein of unknown function DUF876.
 
  
 0.975
Acry_2088
PFAM: ImcF domain protein; protein of unknown function DUF1215.
 
  
 0.969
Acry_2087
Uncharacterized protein-like protein.
 
  
 0.967
Acry_2092
Putative FHA domain containing protein; PFAM: Forkhead-associated protein.
 
  
 0.967
Acry_2094
PFAM: Rhs element Vgr protein; Gp5 domain protein.
 
  
 0.950
Acry_2093
Hypothetical protein.
 
   
 0.942
Acry_3073
PFAM: uncharacterised conserved protein UCP028301.
 
  
 0.901
Acry_3076
PFAM: protein of unknown function DUF879.
 
  
 0.891
Acry_2086
PFAM: protein phosphatase 2C domain protein.
 
  
 0.889
Your Current Organism:
Acidiphilium cryptum
NCBI taxonomy Id: 349163
Other names: A. cryptum JF-5, Acidiphilium cryptum JF-5, Acidiphilium cryptum str. JF-5, Acidiphilium cryptum strain JF-5, Acidiphilum cryptum JF-5
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