Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acry_2170PFAM: protein of unknown function DUF1058. (177 aa)    
Predicted Functional Partners:
Acry_2171
PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein.
       0.816
Acry_2169
PFAM: GcrA cell cycle regulator.
 
     0.766
Acry_0180
Uncharacterized protein-like protein; Belongs to the UPF0335 family.
  
     0.730
Acry_1336
PFAM: protein of unknown function DUF1321.
  
     0.730
Acry_1454
Inactivated superfamily I helicase-like protein.
  
     0.720
atpF2
H+-transporting two-sector ATPase, B/B' subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
     0.676
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.664
ftsQ
Polypeptide-transport-associated domain protein, FtsQ-type; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.655
Acry_3091
Transcriptional regulator, CarD family; PFAM: transcription factor CarD.
  
     0.652
Acry_0170
PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit.
  
     0.645
Your Current Organism:
Acidiphilium cryptum
NCBI taxonomy Id: 349163
Other names: A. cryptum JF-5, Acidiphilium cryptum JF-5, Acidiphilium cryptum str. JF-5, Acidiphilium cryptum strain JF-5, Acidiphilum cryptum JF-5
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