Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Acry_2963PFAM: polysaccharide export protein. (213 aa)    
Predicted Functional Partners:
Acry_2964
PFAM: lipopolysaccharide biosynthesis protein.
 
 
 0.991
Acry_1523
Non-specific protein-tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein.
 
 
 0.983
Acry_2965
ATPase involved in chromosome partitioning-like protein.
 
 
 0.967
Acry_2970
Glycosyltransferase-like protein.
 
  
 0.926
Acry_1524
PFAM: polysaccharide export protein.
  
  
 
0.925
Acry_2968
PFAM: polysaccharide deacetylase.
 
   
 0.922
Acry_2969
Hypothetical protein.
 
     0.917
Acry_2971
TIGRFAM: eight transmembrane protein EpsH.
 
     0.917
Acry_2967
SMART: AAA ATPase.
 
     0.911
Acry_2668
Hypothetical protein.
 
  
 0.838
Your Current Organism:
Acidiphilium cryptum
NCBI taxonomy Id: 349163
Other names: A. cryptum JF-5, Acidiphilium cryptum JF-5, Acidiphilium cryptum str. JF-5, Acidiphilium cryptum strain JF-5, Acidiphilum cryptum JF-5
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