Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acry_2986Transcriptional regulator, DeoR family; PFAM: regulatory protein, DeoR. (260 aa)    
Predicted Functional Partners:
Acry_0458
Transcriptional regulator, DeoR family; PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein.
  
     0.763
Acry_0189
Fructose PTS system EIIBC or EIIC component; TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit; 4.A.2.1.1; 4.A.2.1.1.
 
  
 0.748
Acry_2987
TIGRFAM: L-rhamnose isomerase; PFAM: Xylose isomerase domain protein TIM barrel.
 
     0.745
Acry_2989
PFAM: carbohydrate kinase, FGGY.
 
   
 0.727
Acry_2988
TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: class II aldolase/adducin family protein; short-chain dehydrogenase/reductase SDR; KR.
     
 0.713
Acry_0188
Fructose-1-phosphate kinase; PFAM: PfkB domain protein; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.671
Acry_0144
PFAM: GCN5-related N-acetyltransferase.
    
   0.657
Acry_2985
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; 3.A.1.2.-.
 
     0.517
Acry_0187
Phosphocarrier protein HPr / PTS system D-fructose-specific IIA component (F1P-forming), Frc family; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: phosphocarrier HPr protein; PEP-utilizing enzyme; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; 4.A.2.1.1.
  
  
 0.494
Acry_2984
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; 3.A.1.2.-.
       0.453
Your Current Organism:
Acidiphilium cryptum
NCBI taxonomy Id: 349163
Other names: A. cryptum JF-5, Acidiphilium cryptum JF-5, Acidiphilium cryptum str. JF-5, Acidiphilium cryptum strain JF-5, Acidiphilum cryptum JF-5
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