STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A11S_120Nucleotidyltransferase family protein. (256 aa)    
Predicted Functional Partners:
A11S_1530
Putative phosphotransferase related to Ser/Thr protein kinase; COG3178.
 
 
 0.978
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
 
  
  0.914
A11S_953
dTDP-glucose 4,6-dehydratase.
 
  
 0.821
A11S_119
ATP-dependent nuclease subunit B; FIG041266.
       0.819
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
    
 0.808
A11S_118
ATP-dependent nuclease subunit A; FIG061771; Belongs to the helicase family. UvrD subfamily.
       0.807
A11S_121
ATPase YjeE, predicted to have essential role in cell wall biosynthesis.
       0.807
A11S_1349
UDP-N-acetylmuramate--alanine ligase.
    
  0.802
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
    
  0.802
A11S_300
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase.
  
  
 0.765
Your Current Organism:
Micavibrio aeruginosavorus EPB
NCBI taxonomy Id: 349215
Other names: M. aeruginosavorus EPB, Micavibrio sp. EPB
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