Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A11S_1256 | A11S_228 | Citrate synthase (si); Belongs to the citrate synthase family. | Acetoacetyl-CoA synthetase. | 0.705 |
A11S_1256 | A11S_2322 | Citrate synthase (si); Belongs to the citrate synthase family. | Enoyl-CoA hydratase [isoleucine degradation] / 3-hydroxyacyl-CoA dehydrogenase. | 0.797 |
A11S_1256 | A11S_735 | Citrate synthase (si); Belongs to the citrate synthase family. | NADP-dependent malic enzyme. | 0.950 |
A11S_1256 | A11S_776 | Citrate synthase (si); Belongs to the citrate synthase family. | Acetyl-CoA C-acyltransferase / Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.931 |
A11S_1256 | A11S_805 | Citrate synthase (si); Belongs to the citrate synthase family. | Hydroxymethylglutaryl-CoA lyase. | 0.824 |
A11S_1256 | A11S_925 | Citrate synthase (si); Belongs to the citrate synthase family. | 3-ketoacyl-CoA thiolase / Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.931 |
A11S_1940 | A11S_228 | Acetate permease ActP (cation/acetate symporter); Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Acetoacetyl-CoA synthetase. | 0.714 |
A11S_1940 | A11S_2322 | Acetate permease ActP (cation/acetate symporter); Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Enoyl-CoA hydratase [isoleucine degradation] / 3-hydroxyacyl-CoA dehydrogenase. | 0.529 |
A11S_1940 | A11S_735 | Acetate permease ActP (cation/acetate symporter); Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | NADP-dependent malic enzyme. | 0.570 |
A11S_228 | A11S_1256 | Acetoacetyl-CoA synthetase. | Citrate synthase (si); Belongs to the citrate synthase family. | 0.705 |
A11S_228 | A11S_1940 | Acetoacetyl-CoA synthetase. | Acetate permease ActP (cation/acetate symporter); Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.714 |
A11S_228 | A11S_2322 | Acetoacetyl-CoA synthetase. | Enoyl-CoA hydratase [isoleucine degradation] / 3-hydroxyacyl-CoA dehydrogenase. | 0.988 |
A11S_228 | A11S_264 | Acetoacetyl-CoA synthetase. | D-beta-hydroxybutyrate dehydrogenase. | 0.905 |
A11S_228 | A11S_735 | Acetoacetyl-CoA synthetase. | NADP-dependent malic enzyme. | 0.731 |
A11S_228 | A11S_776 | Acetoacetyl-CoA synthetase. | Acetyl-CoA C-acyltransferase / Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.939 |
A11S_228 | A11S_785 | Acetoacetyl-CoA synthetase. | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 0.705 |
A11S_228 | A11S_805 | Acetoacetyl-CoA synthetase. | Hydroxymethylglutaryl-CoA lyase. | 0.923 |
A11S_228 | A11S_925 | Acetoacetyl-CoA synthetase. | 3-ketoacyl-CoA thiolase / Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.939 |
A11S_228 | A11S_926 | Acetoacetyl-CoA synthetase. | Acetoacetyl-CoA reductase. | 0.905 |
A11S_2322 | A11S_1256 | Enoyl-CoA hydratase [isoleucine degradation] / 3-hydroxyacyl-CoA dehydrogenase. | Citrate synthase (si); Belongs to the citrate synthase family. | 0.797 |
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