STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A11S_228Acetoacetyl-CoA synthetase. (669 aa)    
Predicted Functional Partners:
A11S_2322
Enoyl-CoA hydratase [isoleucine degradation] / 3-hydroxyacyl-CoA dehydrogenase.
  
 0.988
A11S_776
Acetyl-CoA C-acyltransferase / Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.939
A11S_925
3-ketoacyl-CoA thiolase / Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.939
A11S_805
Hydroxymethylglutaryl-CoA lyase.
  
 
 0.923
A11S_264
D-beta-hydroxybutyrate dehydrogenase.
    
 0.905
A11S_926
Acetoacetyl-CoA reductase.
    
 0.905
A11S_735
NADP-dependent malic enzyme.
  
 
 0.731
A11S_1940
Acetate permease ActP (cation/acetate symporter); Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.714
A11S_1256
Citrate synthase (si); Belongs to the citrate synthase family.
  
 
 0.705
A11S_785
2-methylcitrate synthase; Belongs to the citrate synthase family.
  
 
 0.705
Your Current Organism:
Micavibrio aeruginosavorus EPB
NCBI taxonomy Id: 349215
Other names: M. aeruginosavorus EPB, Micavibrio sp. EPB
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