Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A11S_883 | A11S_884 | Hypothetical protein. | Membrane protein, putative. | 0.535 |
A11S_883 | A11S_885 | Hypothetical protein. | Hypothetical protein. | 0.535 |
A11S_883 | A11S_886 | Hypothetical protein. | Universal stress protein UspA-related nucleotide-binding protein; COG0589. | 0.436 |
A11S_883 | A11S_887 | Hypothetical protein. | NifU-like domain protein. | 0.400 |
A11S_884 | A11S_883 | Membrane protein, putative. | Hypothetical protein. | 0.535 |
A11S_884 | A11S_885 | Membrane protein, putative. | Hypothetical protein. | 0.954 |
A11S_884 | A11S_886 | Membrane protein, putative. | Universal stress protein UspA-related nucleotide-binding protein; COG0589. | 0.918 |
A11S_884 | A11S_887 | Membrane protein, putative. | NifU-like domain protein. | 0.622 |
A11S_885 | A11S_883 | Hypothetical protein. | Hypothetical protein. | 0.535 |
A11S_885 | A11S_884 | Hypothetical protein. | Membrane protein, putative. | 0.954 |
A11S_885 | A11S_886 | Hypothetical protein. | Universal stress protein UspA-related nucleotide-binding protein; COG0589. | 0.922 |
A11S_885 | A11S_887 | Hypothetical protein. | NifU-like domain protein. | 0.624 |
A11S_886 | A11S_883 | Universal stress protein UspA-related nucleotide-binding protein; COG0589. | Hypothetical protein. | 0.436 |
A11S_886 | A11S_884 | Universal stress protein UspA-related nucleotide-binding protein; COG0589. | Membrane protein, putative. | 0.918 |
A11S_886 | A11S_885 | Universal stress protein UspA-related nucleotide-binding protein; COG0589. | Hypothetical protein. | 0.922 |
A11S_886 | A11S_887 | Universal stress protein UspA-related nucleotide-binding protein; COG0589. | NifU-like domain protein. | 0.754 |
A11S_887 | A11S_883 | NifU-like domain protein. | Hypothetical protein. | 0.400 |
A11S_887 | A11S_884 | NifU-like domain protein. | Membrane protein, putative. | 0.622 |
A11S_887 | A11S_885 | NifU-like domain protein. | Hypothetical protein. | 0.624 |
A11S_887 | A11S_886 | NifU-like domain protein. | Universal stress protein UspA-related nucleotide-binding protein; COG0589. | 0.754 |