STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mthe_0165PFAM: protein of unknown function UPF0153; KEGG: mma:MM2374 hypothetical protein. (200 aa)    
Predicted Functional Partners:
guaAA
GMP synthase, small subunit; Catalyzes the synthesis of GMP from XMP.
       0.800
Mthe_0655
KEGG: mac:MA3684 hypothetical protein.
  
     0.682
Mthe_1489
PFAM: phosphoesterase, RecJ domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: RNA binding S1 domain protein; KEGG: mba:Mbar_A3472 hypothetical protein.
  
    0.602
Mthe_1232
PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mac:MA1411 ATP-dependent DNA helicase.
 
    0.568
Mthe_0612
PFAM: regulatory protein, ArsR; KEGG: mma:MM1257 transcriptional regulator, ArsR family.
  
     0.539
Mthe_1661
tRNA-archaeosine synthase; PFAM: PUA domain containing protein; KEGG: mba:Mbar_A0956 archaeosine tRNA-ribosyltransferase.
 
     0.539
Mthe_0137
KEGG: mma:MM2384 hypothetical protein.
 
     0.526
gpmI
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family.
       0.507
Mthe_0270
KEGG: hma:rrnAC2702 hypothetical protein.
 
     0.504
Mthe_0660
KEGG: mac:MA0036 signal sequence peptidase.
 
    0.498
Your Current Organism:
Methanothrix thermoacetophila
NCBI taxonomy Id: 349307
Other names: M. thermoacetophila PT, Methanosaeta thermophila PT, Methanothrix thermoacetophila PT, Methanothrix thermophila DSM 6194, Methanothrix thermophila PT
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