STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mthe_0210KEGG: mbu:Mbur_2264 hypothetical protein. (63 aa)    
Predicted Functional Partners:
Mthe_0209
Hypothetical protein.
       0.782
Mthe_0211
PFAM: glutamate synthase, alpha subunit domain protein; KEGG: afu:AF0954 hypothetical protein.
       0.465
Mthe_0212
Glutamate synthase (NADPH) GltB2 subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; ferredoxin-dependent glutamate synthase; KEGG: afu:AF0953 glutamate synthase (NADPH) alpha chain; Belongs to the glutamate synthase family.
       0.465
Mthe_0213
Glutamate synthase (NADPH) GltB1 subunit; PFAM: glutamine amidotransferase, class-II; KEGG: afu:AF0952 hypothetical protein.
       0.465
Your Current Organism:
Methanothrix thermoacetophila
NCBI taxonomy Id: 349307
Other names: M. thermoacetophila PT, Methanosaeta thermophila PT, Methanothrix thermoacetophila PT, Methanothrix thermophila DSM 6194, Methanothrix thermophila PT
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.