STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mthe_0525KEGG: mth:MTH238 tungsten formylmethanofuran dehydrogenase, subunit C homolog. (295 aa)    
Predicted Functional Partners:
Mthe_0915
TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: dps:DP0682 probable formate dehydrogenase, alpha chain.
  
 0.968
ftr
Formylmethanofuran-tetrahydromethanopterin formyltransferase; Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family.
 
  
 0.933
Mthe_1163
Sulfide dehydrogenase (flavoprotein) subunit SudA; TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tte:TTE0693 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
 
 0.925
Mthe_1339
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mja:MJ1353m formate dehydrogenase.
  
 0.888
Mthe_0976
Formylmethanofuran dehydrogenase, subunit D; PFAM: molydopterin dinucleotide-binding region; KEGG: mba:Mbar_A2923 tungsten formylmethanofuran dehydrogenase subunit D.
 
 
 0.852
Mthe_1097
PFAM: Amidohydrolase 3; KEGG: mma:MM1979 tungsten formylmethanofuran dehydrogenase, subunit A.
 
 
 0.839
Mthe_1095
Formylmethanofuran dehydrogenase, subunit D; PFAM: molydopterin dinucleotide-binding region; KEGG: mma:MM1981 tungsten formylmethanofuran dehydrogenase, subunit D.
 
 
 0.820
Mthe_0977
KEGG: mma:MM0059 tungsten formylmethanofuran dehydrogenase subunit B.
 
 
 0.788
Mthe_1575
Formylmethanofuran dehydrogenase, subunit F; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mbu:Mbur_0553 4Fe-4S ferredoxin, iron-sulfur binding.
  
 
 0.788
Mthe_0978
Formylmethanofuran dehydrogenase, subunit G; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: mbu:Mbur_0335 putative Fe-S cluster protein.
 
   0.787
Your Current Organism:
Methanothrix thermoacetophila
NCBI taxonomy Id: 349307
Other names: M. thermoacetophila PT, Methanosaeta thermophila PT, Methanothrix thermoacetophila PT, Methanothrix thermophila DSM 6194, Methanothrix thermophila PT
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