STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mthe_1552PFAM: glycogen synthase; KEGG: mma:MM0585 hypothetical protein. (594 aa)    
Predicted Functional Partners:
Mthe_1553
Putative circadian clock protein, KaiC; PFAM: KaiC domain protein; KEGG: mbu:Mbur_2095 KaiC.
       0.795
Mthe_1551
PFAM: glycosyl transferase, group 1; KEGG: mta:Moth_1934 glycosyl transferase, group 1.
       0.780
Mthe_1550
KEGG: mbu:Mbur_0434 sulfate adenylyltransferase.
       0.605
Mthe_0981
KEGG: mac:MA0687 heterodisulfide reductase, subunit E.
  
     0.585
Mthe_0255
Alpha-amylase; PFAM: glycoside hydrolase, family 57; KEGG: mbu:Mbur_0437 alpha-amylase.
 
     0.574
Mthe_1549
PFAM: glycosyl transferase, group 1; KEGG: mbu:Mbur_0266 glycosyl transferase, group 1.
 
     0.564
Mthe_0866
KEGG: mma:MM1551 hypothetical protein.
  
     0.523
Mthe_0254
TIGRFAM: glycogen debranching enzyme, putative; PFAM: Amylo-alpha-1,6-glucosidase; KEGG: mbu:Mbur_0439 glycogen debranching enzyme.
 
     0.499
Mthe_1288
PFAM: Fe-S cluster domain protein; KEGG: mma:MM2262 hypothetical protein.
  
     0.499
Mthe_0550
PFAM: Protein of unknown function DUF166; KEGG: mac:MA4432 hypothetical protein.
  
     0.464
Your Current Organism:
Methanothrix thermoacetophila
NCBI taxonomy Id: 349307
Other names: M. thermoacetophila PT, Methanosaeta thermophila PT, Methanothrix thermoacetophila PT, Methanothrix thermophila DSM 6194, Methanothrix thermophila PT
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.