STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCK_00559Phosphatidylglycerophosphatase A; COG1267I. (162 aa)    
Predicted Functional Partners:
serC
Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
       0.775
LCK_00558
D-isomer specific 2-hydroxyacid dehydrogenase family protein; COG0111HE; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.775
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COG0558I; TIGR00560; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.596
LCK_00560
DUF28 domain-containing protein; COG0217S.
       0.498
divIVA
Cell division initiation protein; COG3599D.
  
     0.488
ribA
3,4-dihydroxy-2-butanone 4-phosphate synthase; COG0807H; In the N-terminal section; belongs to the DHBP synthase family.
     
 0.445
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.417
Your Current Organism:
Leuconostoc citreum
NCBI taxonomy Id: 349519
Other names: L. citreum KM20, Leuconostoc citreum KM20, Leuconostoc citreum str. KM20, Leuconostoc citreum strain KM20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.