STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCK_00780Lipase, putative. (337 aa)    
Predicted Functional Partners:
LCK_00055
Probable lipase/esterase; COG0657I.
  
     0.629
LCK_00927
Predicted nucleoside-diphosphate-sugar epimerase; COG0702MG.
 
   0.547
LCK_00779
Hypothetical protein.
       0.515
LCK_00037
Esterase/lipase; COG0657I.
  
     0.468
LCK_00781
Protein of unknown function.
       0.459
Your Current Organism:
Leuconostoc citreum
NCBI taxonomy Id: 349519
Other names: L. citreum KM20, Leuconostoc citreum KM20, Leuconostoc citreum str. KM20, Leuconostoc citreum strain KM20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.