STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCK_01146Small hydrophobic molecule transporter protein, putative; COG0705R. (229 aa)    
Predicted Functional Partners:
LCK_01145
Uncharacterized protein conserved in bacteria; COG4483S.
       0.800
LCK_01010
Membrane protease subunit, stomatin/prohibitin-like protein; COG0330O.
   
 0.747
rexA
ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddA nuclease domain is required for chi fragment generation; this subunit has the helicase and 3' -> 5' nuclease activities; Belongs to the helicase family. AddA subfamily.
       0.674
rexB
ATP-dependent nuclease, subunit B; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' -> 3' nuclease activity; Belongs to the helicase family. AddB/RexB type 2 subfamily.
       0.666
lytH
N-acetylmuramoyl-L-alanine amidase; COG0860M.
  
   0.645
glk
Glucokinase; COG1940KG.
       0.532
fthC
5-formyltetrahydrofolate cyclo-ligase; COG0212H; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.500
LCK_01149
DUF402 domain-containing protein; COG3557J; Belongs to the UPF0374 family.
       0.482
recX
Putative regulatory protein, RecX family; Modulates RecA activity; Belongs to the RecX family.
 
     0.467
LCK_01154
Metal-dependent amidase/aminoacylase/carboxypeptidase; Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate.
  
  
 0.410
Your Current Organism:
Leuconostoc citreum
NCBI taxonomy Id: 349519
Other names: L. citreum KM20, Leuconostoc citreum KM20, Leuconostoc citreum str. KM20, Leuconostoc citreum strain KM20
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