STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCK_01160DedA family protein; COG0586S. (225 aa)    
Predicted Functional Partners:
LCK_01158
Nicotinic acid phosphoribosyltransferase; COG1488H; Belongs to the NAPRTase family.
       0.661
LCK_01159
Predicted transcriptional regulator.
       0.661
LCK_01157
Hypothetical protein.
       0.654
LCK_01644
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; COG1053C; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
    
  0.514
LCK_01161
Putative nucleoside deoxyribosyltransferase.
       0.461
Your Current Organism:
Leuconostoc citreum
NCBI taxonomy Id: 349519
Other names: L. citreum KM20, Leuconostoc citreum KM20, Leuconostoc citreum str. KM20, Leuconostoc citreum strain KM20
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.