STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCK_01689Protein of unknown function. (267 aa)    
Predicted Functional Partners:
LCK_01690
Protein of unknown function.
 
    0.913
LCK_00552
Protein of unknown function.
  
     0.711
LCK_00582
Predicted HD superfamily hydrolase.
  
     0.681
LCK_00239
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
  
     0.657
LCK_00493
Protein of unknown function.
  
     0.587
LCK_01620
Membrane protein; Related to metalloendopeptidases.
  
     0.577
LCK_01691
Hypothetical protein.
       0.572
LCK_00638
Protein of unknown function.
  
     0.527
LCK_01685
Predicted transcriptional regulator.
  
     0.523
LCK_00298
Predicted phosphohydrolase.
  
     0.521
Your Current Organism:
Leuconostoc citreum
NCBI taxonomy Id: 349519
Other names: L. citreum KM20, Leuconostoc citreum KM20, Leuconostoc citreum str. KM20, Leuconostoc citreum strain KM20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.