STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_00084Methyl-accepting chemotaxis protein; COG0840. (541 aa)    
Predicted Functional Partners:
HCH_03847
Chemotaxis protein histidine kinase and related kinase; COG0643.
 
 0.978
HCH_00455
Chemotaxis protein histidine kinase and related kinase; COG0643.
 
 0.959
HCH_03709
Chemotaxis protein histidine kinase and related kinase; COG0643.
 
 0.959
HCH_05168
Chemotaxis protein histidine kinase and related kinase; COG0643.
 
 0.959
HCH_05161
Chemotaxis signal transduction protein; COG0835.
 
  0.953
HCH_03706
Chemotaxis signal transduction protein; COG0835.
 
  0.948
HCH_00456
Chemotaxis signal transduction protein; COG0835.
 
  0.945
HCH_00459
Chemotaxis signal transduction protein; COG0835.
 
  0.941
HCH_03851
Chemotaxis signal transduction protein; COG0835.
 
  0.937
HCH_04764
Chemotaxis signal transduction protein; COG0835.
 
 0.936
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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