STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_00201ABC-type sugar transport system, periplasmic component; COG1653. (426 aa)    
Predicted Functional Partners:
HCH_00203
ABC-type sugar transport system, permease components; COG1175.
 0.994
HCH_00204
ABC-type sugar transport system, permease component; COG0395.
 
 0.992
HCH_00206
ABC-type sugar transport system, ATPase components; COG3839; Belongs to the ABC transporter superfamily.
  
 0.929
HCH_00479
ABC-type sugar transport system, ATPase components; COG3839; Belongs to the ABC transporter superfamily.
  
 0.894
HCH_01297
ABC-type sugar transport system, ATPase components; COG3839; Belongs to the ABC transporter superfamily.
  
 0.894
HCH_03299
ABC-type sugar transport system, ATPase components; COG3839; Belongs to the ABC transporter superfamily.
  
 0.894
HCH_06906
ABC-type sugar transport system, ATPase components; COG3839; Belongs to the ABC transporter superfamily.
  
 0.894
HCH_03298
ABC-type sugar transport system, permease component; COG0395.
 
 
 0.779
HCH_01296
ABC-type sugar transport system, permease component; COG0395.
 
 
 0.761
HCH_03297
ABC-type sugar transport system, permease components; COG1175.
 
 0.751
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.