STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_00237Membrane-fusion protein; COG0845. (322 aa)    
Predicted Functional Partners:
HCH_00236
ABC-type multidrug transport system, ATPase component; COG1131.
  
 0.967
HCH_00235
ABC-type multidrug transport system, permease component; COG0842.
 
  
 0.963
HCH_01963
ABC-type multidrug transport system, permease component; COG0842.
 
  
 0.805
macB
ABC-type antimicrobial peptide transport system, permease component; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.786
HCH_06117
ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; COG2274.
  
 
 0.761
HCH_05996
Outer membrane protein; COG1538.
 
 
 0.722
HCH_01213
Outer membrane protein; COG1538.
 
 
 0.697
HCH_06940
Outer membrane protein; COG1538.
 
 
 0.680
HCH_04133
Outer membrane protein; COG1538.
  
 
 0.637
HCH_03018
Outer membrane protein; COG1538.
  
 
 0.603
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.