STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_00342Conserved hypothetical protein. (307 aa)    
Predicted Functional Partners:
gspC
General secretion pathway protein C; TIGRFAMsMatches:TIGR01713.
  
     0.549
gspH
General secretion pathway protein H; TIGRFAMsMatches:TIGR01708.
  
     0.523
gspJ
General secretion pathway protein J; TIGRFAMsMatches:TIGR01711.
  
     0.498
gspL
Type II secretory pathway, component PulL; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.496
HCH_03938
Hypothetical protein.
  
     0.493
gspI
General secretion pathway protein I; TIGRFAMsMatches:TIGR01707.
  
     0.487
HCH_06137
Uncharacterized membrane protein; COG0705; similar to Drosophila rhomboid.
  
     0.486
HCH_00341
Hypothetical protein.
       0.473
HCH_02128
SH3 domain protein; COG3103.
  
     0.458
gspM
Type II secretory pathway, component PulM; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.445
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.