STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftsEPredicted ATPase involved in cell division; Part of the ABC transporter FtsEX involved in cellular division. (225 aa)    
Predicted Functional Partners:
HCH_00574
Cell division protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 0.994
HCH_01261
ABC-type antimicrobial peptide transport system, permease component; COG0577.
   
 0.919
HCH_01262
ABC-type antimicrobial peptide transport system, permease component; COG0577.
   
 0.917
HCH_06901
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; COG0444; Belongs to the ABC transporter superfamily.
 
    
0.904
HCH_01130
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; COG0444; Belongs to the ABC transporter superfamily.
 
     
0.899
HCH_03754
ABC-type amino acid transport system, permease component; COG0765.
      0.863
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.
     
 0.801
HCH_01351
Membrane-bound metallopeptidase; COG4942.
 
   
 0.725
HCH_06708
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic components; COG0715.
 
      0.638
rpoH
RNA polymerase sigma-32 factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.
  
  
 0.616
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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