STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_01050Glycosyltransferase; COG0438. (375 aa)    
Predicted Functional Partners:
HCH_01052
Glycosyltransferase involved in cell wall biogenesis; COG0463.
 
   0.775
HCH_02738
Glycosyltransferase; COG0438.
  
     0.765
HCH_02728
Glycosyltransferase; COG0438.
  
     0.752
HCH_01051
Probable O-antigen polymerase.
  
  
 0.749
HCH_01055
Glycosyltransferase; COG0438.
 
    
0.708
HCH_02234
Nucleoside-diphosphate-sugar epimerase; COG0451.
 
    0.682
HCH_02714
Sugar transferase involved in lipopolysaccharide synthesis; COG2148.
 
  
 0.642
HCH_01056
Glycosyltransferase; COG0438.
  
     0.631
HCH_01746
Glycosyltransferase; COG0438.
  
     0.627
HCH_01053
Zn-dependent alcohol dehydrogenase, class III; COG1062.
     
 0.623
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.