STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
allBDihydroorotase and related cyclic amidoHydrolase; COG0044. (455 aa)    
Predicted Functional Partners:
pyrB
Aspartate carbamoyltransferase; TIGRFAMsMatches:TIGR00670; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
 0.996
HCH_01094
Uncharacterized protein conserved in bacteria; COG3195.
  
 0.996
alc
Allantoicase; COG4266; Belongs to the allantoicase family.
 
 0.991
carB
Carbamoylphosphate synthase large subunit; COG0458; split gene in MJ; Belongs to the CarB family.
 
 0.985
carA
Carbamoylphosphate synthase small subunit; COG0505; Belongs to the CarA family.
 
  
 0.977
HCH_01093
Transthyretin-like protein; COG2351; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
   
 0.916
garK
Glycerate kinase; COG1929; Belongs to the glycerate kinase type-1 family.
 
  
 0.908
HCH_00552
Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; COG2065.
  
 
 0.902
xdhB
Xanthine dehydrogenase, molybdopterin-binding subunit B; COG4631.
 
  
 0.860
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 
 0.851
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.