STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_01103Uncharacterized ABC-type transport system, permease component; COG1079; Belongs to the binding-protein-dependent transport system permease family. (308 aa)    
Predicted Functional Partners:
HCH_01102
ABC-type uncharacterized transport system, permease component; COG4603; Belongs to the binding-protein-dependent transport system permease family.
 
0.996
HCH_01101
ABC-type uncharacterized transport system, ATPase components; COG3845.
 
 0.994
HCH_02311
ABC-type uncharacterized transport system, permease component; COG4603; Belongs to the binding-protein-dependent transport system permease family.
 
 0.993
HCH_02310
ABC-type uncharacterized transport system, ATPase components; COG3845.
 
 0.988
HCH_01105
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein; COG1744.
 
 
 0.986
HCH_01504
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein; COG1744.
 
 
 0.973
HCH_02309
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein; COG1744.
 
 
 0.969
HCH_02312
Uncharacterized ABC-type transport system, permease component; COG1079; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.920
HCH_01106
Cytosine deaminase and related metal-dependent Hydrolase; COG0402.
 
     0.503
HCH_01100
Hypothetical protein.
       0.418
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.