STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_01160Sugar kinase, ribokinase family; COG0524. (640 aa)    
Predicted Functional Partners:
HCH_05767
Uncharacterized enzyme involved in inositol metabolism; COG3718.
 
 0.998
iolD
Acetolactate synthase; COG3962; Belongs to the TPP enzyme family.
 
  
 0.984
HCH_01158
Sugar phosphate isomerases/epimerase; COG1082.
  
 0.973
HCH_05768
Predicted dehydrogenase and related protein; COG0673.
  
 0.961
HCH_05773
Predicted dehydrogenase and related protein; COG0673.
 
  
 0.903
HCH_05772
Transcriptional regulator; COG1737.
 
   
 0.820
HCH_01162
Predicted sugar epimerase; COG4130.
 
    0.807
HCH_04629
Conserved hypothetical protein.
  
  
 0.766
HCH_01170
ABC-type sugar transport system, periplasmic component; COG1879.
 
  
 0.656
hisA
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; TIGRFAMsMatches:TIGR00007.
  
    0.626
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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