STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_01683Acyl dehydratase; COG2030. (151 aa)    
Predicted Functional Partners:
HCH_04350
NADPH:quinone reductase and related Zn-dependent oxidoreductase; COG0604.
 
 0.952
HCH_01682
Hypothetical protein.
       0.737
HCH_06638
Acyl-CoA dehydrogenase; COG1960.
 
 0.674
fadB
3-hydroxyacyl-CoA dehydrogenase; COG1250; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.669
HCH_03409
3-hydroxyacyl-CoA dehydrogenase; COG1250; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.617
HCH_04756
3-hydroxyacyl-CoA dehydrogenase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.617
HCH_01681
L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase; COG1304.
  
 
 0.587
HCH_06636
Predicted aminoglycoside phosphotransferase; COG3173.
 
 
 0.581
HCH_01409
Predicted metal-sulfur cluster biosynthetic enzyme; COG2151.
  
  
 0.567
HCH_06234
Biotin-(acetyl-CoA carboxylase) ligase; COG0340.
  
  
 0.554
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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