STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_01809Conserved hypothetical protein. (114 aa)    
Predicted Functional Partners:
HCH_01904
Conserved hypothetical protein.
  
     0.679
HCH_00319
Glutamate dehydrogenase/leucine dehydrogenase; COG0334.
  
    0.616
HCH_05917
Hypothetical protein.
  
     0.568
HCH_06008
Conserved hypothetical protein.
  
     0.553
HCH_01247
Conserved hypothetical protein.
  
    0.525
HCH_01066
Conserved hypothetical protein.
  
     0.519
HCH_05961
Conserved hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein.
  
    0.507
HCH_06252
Uncharacterized low-complexity protein; COG1357.
  
    0.502
HCH_02530
Methyl-accepting chemotaxis protein; COG0840.
  
     0.487
ppc
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.
       0.473
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.