STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_01834ABC-type dipeptide transport system, periplasmic component; COG0747. (516 aa)    
Predicted Functional Partners:
HCH_01833
ABC-type dipeptide/oligopeptide/nickel transport system, permease components; COG0601.
 
 0.943
HCH_01832
ABC-type dipeptide/oligopeptide/nickel transport system, permease components; COG1173.
 
 0.931
HCH_01831
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; COG0444; Belongs to the ABC transporter superfamily.
  
 0.897
HCH_01830
ABC-type oligopeptide transport system, ATPase component; COG4608; Belongs to the ABC transporter superfamily.
  
 0.894
HCH_00011
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; COG0444; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.773
HCH_01829
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
 
     0.711
HCH_00012
ABC-type dipeptide/oligopeptide/nickel transport system, permease components; COG0601.
 
 0.628
HCH_06903
ABC-type dipeptide/oligopeptide/nickel transport system, permease components; COG0601.
 
 0.621
HCH_00701
ABC-type dipeptide/oligopeptide/nickel transport system, permease components; COG1173.
 
 
 0.585
HCH_06902
ABC-type dipeptide/oligopeptide/nickel transport system, permease components; COG1173.
 
 0.584
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.