STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_02298Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family. (298 aa)    
Predicted Functional Partners:
HCH_04858
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.708
HCH_01562
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.692
HCH_04256
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.678
HCH_03348
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.602
penP
Beta-lactamase class A; COG2367.
 
     0.577
HCH_06627
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.535
HCH_07022
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.532
HCH_03797
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.517
HCH_02426
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.514
HCH_06621
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.487
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.