STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_02305Transcriptional regulator; COG1846. (158 aa)    
Predicted Functional Partners:
HCH_01357
Predicted redox protein, regulator of disulfide bond formation; COG1764.
  
 0.959
HCH_02304
Glutathione peroxidase; COG0386; Belongs to the glutathione peroxidase family.
  
  
 0.821
HCH_06801
Transcriptional regulator; COG1846.
  
     0.538
HCH_02303
3-methyladenine DNA glycosylase; COG2818.
       0.470
msrB
Conserved domain frequently associated with peptide methionine sulfoxide reductase; COG0229; Belongs to the MsrB Met sulfoxide reductase family.
       0.454
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.