STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_02781FOG: GGDEF domain; COG2199. (673 aa)    
Predicted Functional Partners:
HCH_03647
Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; COG5001.
 
 
0.917
HCH_03845
FOG: EAL domain; COG2200.
 
 
0.917
HCH_00967
FOG: EAL domain; COG2200.
 
 0.890
HCH_00809
Signal transduction histidine kinase; COG0642.
 
 0.873
HCH_03713
FOG: EAL domain; COG2200.
  
 0.868
HCH_04270
FOG: EAL domain; COG2200.
  
 0.868
HCH_00794
FOG: PAS/PAC domain; COG2202.
 
 
 0.849
HCH_06013
Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; COG5001.
 
 
0.839
HCH_05456
Response regulator containing a CheY-like receiver domain and a GGDEF domain; COG3706.
  
 
 0.838
HCH_06590
FOG: EAL domain; COG2200.
  
 0.833
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.