STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_02946ABC-type Mn2+/Zn2+ transport system, permease components; COG1108. (249 aa)    
Predicted Functional Partners:
HCH_02945
ABC-type metal ion transport system, periplasmic component/surface adhesin; COG0803.
 
  
 0.986
HCH_02944
Conserved hypothetical protein.
 
     0.952
HCH_02943
FOG: WD40 repeat; COG2319.
  
  
 0.932
znuC2
ABC-type Mn/Zn transport system, ATPase component; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
  
 
 0.931
znuC1
ABC-type Mn/Zn transport system, ATPase component; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
  
 
 0.908
HCH_02942
ABC-type Zn2+ transport system, periplasmic component/surface adhesin; COG4531.
  
  
 0.705
HCH_02939
ABC-type Mn2+/Zn2+ transport system, permease components; COG1108.
    
  0.515
HCH_02413
ABC-type Zn2+ transport system, periplasmic component/surface adhesin; COG4531.
  
  
 0.463
HCH_00656
ABC-type metal ion transport system, periplasmic component/surface adhesin; COG0803.
  
  
 0.439
HCH_01962
ABC-type multidrug transport system, ATPase component; COG1131.
    
 0.430
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.