STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBXylulokinase; TIGRFAMsMatches:TIGR01312. (440 aa)    
Predicted Functional Partners:
HCH_01298
Mannitol-1-phosphate/altronate dehydrogenase; COG0246.
 
 
 0.953
HCH_01901
Ribulose-5-phosphate 4-epimerase and related epimerase and aldolases; COG0235.
  
 
 0.945
rpe
Ribulose-phosphate 3-epimerase; TIGRFAMsMatches:TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.937
HCH_02472
Sugar (pentulose and hexulose) kinase; COG1070; Belongs to the FGGY kinase family.
  
  
 
0.925
HCH_02471
Threonine dehydrogenase and related Zn-dependent dehydrogenase; COG1063.
 
 0.791
HCH_03094
Hypothetical protein.
       0.601
mtnB
Ribulose-5-phosphate 4-epimerase and related epimerase and aldolases; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Belongs to the aldolase class II family. MtnB subfamily.
 
  
 0.558
HCH_02466
Transcriptional regulator; COG1609.
 
 
 
 0.518
HCH_06913
Transcriptional regulator; COG1609.
 
 
 
 0.472
HCH_06905
Transcriptional regulator; COG1609.
 
 
 
 0.471
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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