STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_03316MoxR-like ATPase; COG0714. (364 aa)    
Predicted Functional Partners:
HCH_03317
Uncharacterized conserved protein; COG3831.
     0.957
HCH_03315
4-aminobutyrate aminotransferase and related aminotransferase; COG0160.
 
   
 0.953
HCH_03314
VWA_CoxE family protein.
 
  
 0.952
HCH_05563
Conserved hypothetical protein.
 
  
 0.804
HCH_05564
Conserved hypothetical protein.
 
   
 0.803
HCH_05566
Conserved hypothetical protein.
 
     0.794
HCH_05567
Protein containing SWIM Zn-chelating domain.
 
     0.792
HCH_03313
Transposase and inactivated derivatives; COG2801.
       0.626
HCH_05092
Uncharacterized conserved protein; COG3791.
  
    0.491
HCH_06998
Conserved hypothetical protein.
  
     0.444
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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