HCH_03368 protein (Hahella chejuensis) - STRING interaction network

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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protein homology

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Score

HCH_03368

Methyl-accepting chemotaxis protein; COG0840. (546 aa)

Predicted Functional Partners:

HCH_03847

0.981

HCH_04764

0.961

HCH_05168

0.960

HCH_00455

0.958

HCH_03709

0.958

HCH_05161

0.955

HCH_03706

0.950

HCH_00456

0.949

HCH_00459

0.946

HCH_03851

0.941

Your Current Organism:

Hahella chejuensis

NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
HCH_00455	HCH_00456	Chemotaxis protein histidine kinase and related kinase; COG0643.	Chemotaxis signal transduction protein; COG0835.	0.998
HCH_00455	HCH_00459	Chemotaxis protein histidine kinase and related kinase; COG0643.	Chemotaxis signal transduction protein; COG0835.	0.997
HCH_00455	HCH_03368	Chemotaxis protein histidine kinase and related kinase; COG0643.	Methyl-accepting chemotaxis protein; COG0840.	0.958
HCH_00455	HCH_03706	Chemotaxis protein histidine kinase and related kinase; COG0643.	Chemotaxis signal transduction protein; COG0835.	0.992
HCH_00455	HCH_03847	Chemotaxis protein histidine kinase and related kinase; COG0643.	Chemotaxis protein histidine kinase and related kinase; COG0643.	0.560
HCH_00455	HCH_03851	Chemotaxis protein histidine kinase and related kinase; COG0643.	Chemotaxis signal transduction protein; COG0835.	0.989
HCH_00455	HCH_04764	Chemotaxis protein histidine kinase and related kinase; COG0643.	Chemotaxis signal transduction protein; COG0835.	0.995
HCH_00455	HCH_05161	Chemotaxis protein histidine kinase and related kinase; COG0643.	Chemotaxis signal transduction protein; COG0835.	0.993
HCH_00456	HCH_00455	Chemotaxis signal transduction protein; COG0835.	Chemotaxis protein histidine kinase and related kinase; COG0643.	0.998
HCH_00456	HCH_00459	Chemotaxis signal transduction protein; COG0835.	Chemotaxis signal transduction protein; COG0835.	0.537
HCH_00456	HCH_03368	Chemotaxis signal transduction protein; COG0835.	Methyl-accepting chemotaxis protein; COG0840.	0.949
HCH_00456	HCH_03709	Chemotaxis signal transduction protein; COG0835.	Chemotaxis protein histidine kinase and related kinase; COG0643.	0.991
HCH_00456	HCH_03847	Chemotaxis signal transduction protein; COG0835.	Chemotaxis protein histidine kinase and related kinase; COG0643.	0.991
HCH_00456	HCH_03851	Chemotaxis signal transduction protein; COG0835.	Chemotaxis signal transduction protein; COG0835.	0.769
HCH_00456	HCH_04764	Chemotaxis signal transduction protein; COG0835.	Chemotaxis signal transduction protein; COG0835.	0.798
HCH_00456	HCH_05168	Chemotaxis signal transduction protein; COG0835.	Chemotaxis protein histidine kinase and related kinase; COG0643.	0.991
HCH_00459	HCH_00455	Chemotaxis signal transduction protein; COG0835.	Chemotaxis protein histidine kinase and related kinase; COG0643.	0.997
HCH_00459	HCH_00456	Chemotaxis signal transduction protein; COG0835.	Chemotaxis signal transduction protein; COG0835.	0.537
HCH_00459	HCH_03368	Chemotaxis signal transduction protein; COG0835.	Methyl-accepting chemotaxis protein; COG0840.	0.946
HCH_00459	HCH_03709	Chemotaxis signal transduction protein; COG0835.	Chemotaxis protein histidine kinase and related kinase; COG0643.	0.993

page 1 of 5

Network Stats

number of nodes:

5

number of edges:

9

average node degree:

3.6

avg. local clustering coefficient:

0.9

expected number of edges:

4

PPI enrichment p-value:

0.0189

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0055086

Nucleobase-containing small molecule metabolic process

6 of 198

1.43

1.51

0.00010

GO:0009117

Nucleotide metabolic process

5 of 149

1.48

1.33

0.00063

GO:0072524

Pyridine-containing compound metabolic process

3 of 32

1.93

1.23

0.0038

GO:0019637

Organophosphate metabolic process

6 of 345

1.19

1.07

0.00063

GO:0009113

Purine nucleobase biosynthetic process

2 of 7

2.41

1.05

0.0116

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0008177

Succinate dehydrogenase (ubiquinone) activity

2 of 3

2.78

0.99

0.0165

GO:0000166

Nucleotide binding

7 of 1050

0.78

0.5

0.0165

GO:0043167

Ion binding

9 of 2006

0.61

0.41

0.0165

GO:0003824

Catalytic activity

10 of 3415

0.42

0.29

0.0341

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005737

Cytoplasm

11 of 3920

0.4

0.28

0.0326

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:10713

De novo IMP biosynthetic process, and Tetrahydrofolate interconversion

3 of 15

2.25

1.74

0.00050

CL:10660

Nucleoside monophosphate metabolic process, and One carbon pool by folate

4 of 48

1.87

1.68

0.00034

CL:9614

Fumarate reductase complex, and 3Fe-4S

2 of 5

2.56

1.21

0.0061

CL:7135

Aldehyde biosynthetic process

2 of 6

2.48

1.21

0.0061

CL:10716

De novo IMP biosynthetic process

2 of 5

2.56

1.21

0.0061

(more ...)

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00230

Purine metabolism

4 of 102

1.55

1.39

0.00058

map00020

Citrate cycle (TCA cycle)

2 of 36

1.7

0.76

0.0315

map01110

Biosynthesis of secondary metabolites

5 of 652

0.84

0.49

0.0315

map01100

Metabolic pathways

8 of 2203

0.51

0.33

0.0315

Reactome Pathways

pathway

description

count in network

strength

signal

false discovery rate

MAP-196849

Metabolism of water-soluble vitamins and cofactors

4 of 84

1.63

1.38

0.00087

MAP-197264

Nicotinamide salvaging

2 of 5

2.56

1.23

0.0056

MAP-196854

Metabolism of vitamins and cofactors

4 of 112

1.51

1.2

0.0018

MAP-15869

Metabolism of nucleotides

3 of 69

1.59

0.94

0.0111

MAP-73817

Purine ribonucleoside monophosphate biosynthesis

2 of 13

2.14

0.93

0.0185

(more ...)

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF03853

YjeF-related protein N-terminus

2 of 2

2.95

1.22

0.0063

PF02769

AIR synthase related protein, C-terminal domain

2 of 2

2.95

1.22

0.0063

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR036921

PurM-like, N-terminal domain superfamily

2 of 2

2.95

0.97

0.0181

IPR036676

PurM-like, C-terminal domain superfamily

2 of 2

2.95

0.97

0.0181

IPR036652

YjeF N-terminal domain superfamily

2 of 2

2.95

0.97

0.0181

IPR010918

PurM-like, C-terminal domain

2 of 2

2.95

0.97

0.0181

IPR004443

YjeF N-terminal domain

2 of 2

2.95

0.97

0.0181

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