Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HCH_03522 | HCH_03523 | HCH_03522 | HCH_03523 | Polyferredoxin; COG0348. | COG1167. | 0.535 |
HCH_03523 | HCH_03522 | HCH_03523 | HCH_03522 | COG1167. | Polyferredoxin; COG0348. | 0.535 |
HCH_03523 | HCH_03524 | HCH_03523 | HCH_03524 | COG1167. | Citrate lyase beta subunit; COG2301; Belongs to the HpcH/HpaI aldolase family. | 0.548 |
HCH_03523 | HCH_05302 | HCH_03523 | HCH_05302 | COG1167. | Uncharacterized conserved protein; COG0327. | 0.426 |
HCH_03523 | dapB | HCH_03523 | HCH_01226 | COG1167. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.651 |
HCH_03524 | HCH_03523 | HCH_03524 | HCH_03523 | Citrate lyase beta subunit; COG2301; Belongs to the HpcH/HpaI aldolase family. | COG1167. | 0.548 |
HCH_05302 | HCH_03523 | HCH_05302 | HCH_03523 | Uncharacterized conserved protein; COG0327. | COG1167. | 0.426 |
dapB | HCH_03523 | HCH_01226 | HCH_03523 | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | COG1167. | 0.651 |