STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_03788Cation/multidrug efflux pump; COG0841. (1056 aa)    
Predicted Functional Partners:
HCH_03789
Membrane-fusion protein; COG0845; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.995
HCH_04133
Outer membrane protein; COG1538.
 0.980
HCH_06174
Membrane-fusion protein; COG0845; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.964
HCH_03759
Membrane-fusion protein; COG0845; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.959
HCH_03513
Membrane-fusion protein; COG0845; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.946
HCH_05996
Outer membrane protein; COG1538.
  
 0.940
HCH_02217
Membrane-fusion protein; COG0845; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.928
HCH_01213
Outer membrane protein; COG1538.
 
 0.927
HCH_06940
Outer membrane protein; COG1538.
 
 0.919
HCH_06942
Membrane-fusion protein; COG0845; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.876
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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