STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_03923ABC-type uncharacterized transport system, periplasmic component; COG2984. (315 aa)    
Predicted Functional Partners:
HCH_03922
Outer membrane receptor protein, mostly Fe transport; COG1629.
 
   
 0.944
HCH_03924
Signal transduction histidine kinase; COG0642.
       0.777
HCH_04585
Uncharacterized protein related to plant photosystem II stability/assembly factor; COG4447.
  
     0.667
HCH_04502
ABC-type uncharacterized transport system, permease component; COG4120; Belongs to the binding-protein-dependent transport system permease family.
  
    0.638
HCH_04584
Predicted exporters of the RND superfamily; COG1033.
  
    0.597
HCH_05297
ABC-type dipeptide transport system, periplasmic component; COG0747.
  
   
 0.582
HCH_05283
Conserved hypothetical protein.
  
     0.526
HCH_02198
Predicted Fe-S protein; COG3313.
  
     0.508
HCH_05569
Conserved hypothetical protein.
  
     0.499
HCH_04586
Protein with unknown function (DUF1329).
  
     0.478
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.