STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_04421Transcriptional regulator; COG1522. (169 aa)    
Predicted Functional Partners:
HCH_04422
Transcriptional regulator; COG1522.
  
 0.999
HCH_04420
Transcriptional regulator; COG1522.
  
 0.998
HCH_04424
Cytochrome c, mono- and diheme variants; COG2010.
 
  
 0.990
HCH_04417
Cytochrome c, mono- and diheme variants; COG2010.
 
  
 0.989
HCH_04418
Uncharacterized conserved protein; COG3391.
 
  
 0.989
HCH_04423
Predicted Fe-S oxidoreductase; COG0535.
  
 0.979
HCH_04416
Cytochrome c, mono- and diheme variants; COG2010.
 
  
 0.962
HCH_04419
Transcriptional regulator; COG1522.
 
  
0.915
HCH_04411
Cytochrome c, mono- and diheme variants; COG2010.
 
    0.896
norB
Nitric oxide reductase large subunit; COG3256; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.878
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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