STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_04685Exopolysaccharide production protein; Lipid A core - O-antigen ligase and related enzyme COG3307. (436 aa)    
Predicted Functional Partners:
HCH_02714
Sugar transferase involved in lipopolysaccharide synthesis; COG2148.
  
  
 0.905
HCH_04683
Glycosyltransferase; Teichoic acid biosynthesis protein; COG1922; Belongs to the glycosyltransferase 26 family.
 
  
 0.794
HCH_04684
Glycosyltransferase; COG0438.
  
  
 0.671
HCH_04692
Membrane protein involved in the export of O-antigen and teichoic acid; COG2244.
 
  
 0.671
wcaJ
Putative colanic acid biosynthsis UDP-glucose lipid carrier transferase; Sugar transferase involved in lipopolysaccharide synthesis COG2148.
 
  
 0.636
HCH_03411
Sugar transferase involved in lipopolysaccharide synthesis; COG2148.
 
  
 0.634
HCH_04687
Conserved hypothetical protein.
  
    0.620
HCH_04688
Glycosyltransferase involved in cell wall biogenesis; COG0463.
 
  
 0.616
HCH_02412
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAMsMatches:TIGR01479; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.597
ugd
Predicted UDP-glucose 6-dehydrogenase; COG1004.
  
  
 0.578
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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