STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_04713Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family. (320 aa)    
Predicted Functional Partners:
HCH_04712
Diadenosine tetraphosphatase and related serine/threonine protein phosphatase; COG0639.
       0.773
HCH_00907
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.761
HCH_05483
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.759
HCH_01145
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.752
HCH_01303
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.749
HCH_07022
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.740
HCH_04714
Predicted membrane protein; COG2855; Belongs to the UPF0324 family.
 
     0.739
HCH_06621
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.726
HCH_03912
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.720
HCH_03511
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.716
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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