Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
HCH_00794 | HCH_00809 | FOG: PAS/PAC domain; COG2202. | Signal transduction histidine kinase; COG0642. | 0.985 |
HCH_00794 | HCH_00861 | FOG: PAS/PAC domain; COG2202. | Signal transduction histidine kinase; COG0642. | 0.977 |
HCH_00794 | HCH_00968 | FOG: PAS/PAC domain; COG2202. | Signal transduction histidine kinase; COG0642. | 0.977 |
HCH_00794 | HCH_01314 | FOG: PAS/PAC domain; COG2202. | Methyl-accepting chemotaxis protein; COG0840. | 0.929 |
HCH_00794 | HCH_01804 | FOG: PAS/PAC domain; COG2202. | Signal transduction histidine kinase; COG0642. | 0.977 |
HCH_00794 | HCH_03647 | FOG: PAS/PAC domain; COG2202. | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; COG5001. | 0.989 |
HCH_00794 | HCH_03701 | FOG: PAS/PAC domain; COG2202. | Signal transduction histidine kinase; COG0642. | 0.976 |
HCH_00794 | HCH_03845 | FOG: PAS/PAC domain; COG2202. | FOG: EAL domain; COG2200. | 0.989 |
HCH_00794 | HCH_04933 | FOG: PAS/PAC domain; COG2202. | Signal transduction histidine kinase; COG0642. | 0.982 |
HCH_00794 | HCH_05218 | FOG: PAS/PAC domain; COG2202. | Signal transduction histidine kinase; COG0642. | 0.984 |
HCH_00809 | HCH_00794 | Signal transduction histidine kinase; COG0642. | FOG: PAS/PAC domain; COG2202. | 0.985 |
HCH_00809 | HCH_00861 | Signal transduction histidine kinase; COG0642. | Signal transduction histidine kinase; COG0642. | 0.979 |
HCH_00809 | HCH_00968 | Signal transduction histidine kinase; COG0642. | Signal transduction histidine kinase; COG0642. | 0.979 |
HCH_00809 | HCH_01314 | Signal transduction histidine kinase; COG0642. | Methyl-accepting chemotaxis protein; COG0840. | 0.942 |
HCH_00809 | HCH_01804 | Signal transduction histidine kinase; COG0642. | Signal transduction histidine kinase; COG0642. | 0.980 |
HCH_00809 | HCH_03647 | Signal transduction histidine kinase; COG0642. | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; COG5001. | 0.990 |
HCH_00809 | HCH_03701 | Signal transduction histidine kinase; COG0642. | Signal transduction histidine kinase; COG0642. | 0.979 |
HCH_00809 | HCH_03845 | Signal transduction histidine kinase; COG0642. | FOG: EAL domain; COG2200. | 0.989 |
HCH_00809 | HCH_04933 | Signal transduction histidine kinase; COG0642. | Signal transduction histidine kinase; COG0642. | 0.984 |
HCH_00809 | HCH_05218 | Signal transduction histidine kinase; COG0642. | Signal transduction histidine kinase; COG0642. | 0.987 |
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