STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_05005Stress-induced morphogen; COG0271; Belongs to the BolA/IbaG family. (107 aa)    
Predicted Functional Partners:
HCH_01764
Glutaredoxin-related protein; COG0278; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 0.956
HCH_05004
Putative translation factor (SUA5); COG0009; Belongs to the SUA5 family.
       0.795
nfuA
Thioredoxin-like protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
   
 
 0.627
HCH_00875
Uncharacterized protein conserved in bacteria; COG3184.
  
    0.624
HCH_05006
Protein containing BNR/Asp-box repeats.
       0.507
HCH_04374
DNA-binding ferritin-like protein; COG0783; oxidative damage protectant; Belongs to the Dps family.
   
    0.497
HCH_06408
DNA-binding ferritin-like protein (oxidative damage protectant); COG0783; Belongs to the Dps family.
   
    0.497
HCH_02480
Ferredoxin; COG0633.
  
  
 0.473
HCH_00153
Peroxiredoxin; COG0678.
 
 
 0.461
HCH_00031
Uncharacterized protein containing LysM domain; COG1652.
   
    0.424
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.