STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_05476Transposase and inactivated derivatives; COG3293. (172 aa)    
Predicted Functional Partners:
HCH_01325
Transposase and inactivated derivatives; COG3293.
  
     0.771
HCH_07061
Transposase and inactivated derivatives; COG3293.
 
     0.762
HCH_02355
Transposase and inactivated derivatives; COG3293.
  
     0.752
HCH_03287
Transposase and inactivated derivatives; COG3293.
 
     0.730
HCH_02502
Conserved hypothetical protein.
  
     0.453
HCH_06328
Conserved hypothetical protein.
  
     0.435
HCH_07062
Transposase and inactivated derivatives; COG3293.
  
     0.430
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.