STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_05492Uncharacterized protein conserved in bacteria; COG3237; Belongs to the UPF0337 (CsbD) family. (65 aa)    
Predicted Functional Partners:
HCH_04387
Protein of unknown fuction (DUF1328).
 
  
 0.946
HCH_04381
Predicted periplasmic or secreted lipoprotein; COG2823.
 
  
 0.817
HCH_01596
Uncharacterized conserved protein; COG2930.
  
    0.815
HCH_04789
Uncharacterized conserved protein; COG3360.
   
    0.713
HCH_01431
Protein containing putative phospholipid-binding domain.
  
  
 0.700
HCH_03350
Predicted periplasmic or secreted lipoprotein; COG2823.
  
  
 0.700
arcA
Arginine deiminase; TIGRFAMsMatches:TIGR01078.
  
    0.646
HCH_01357
Predicted redox protein, regulator of disulfide bond formation; COG1764.
  
  
 0.589
HCH_01483
Predicted redox protein, regulator of disulfide bond formation; COG1764.
  
  
 0.589
HCH_02231
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; COG1134.
  
    0.576
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.