STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_05521Zn-dependent Hydrolase, including glyoxylases; COG0491. (288 aa)    
Predicted Functional Partners:
HCH_05522
Coenzyme F390 synthetase; COG1541.
     0.966
HCH_05523
Probable biotin carboxylase.
 
   
 0.914
HCH_05520
Nucleoside-diphosphate-sugar epimerase; COG0451.
     0.908
HCH_05519
3-oxoacyl-[acyl-carrier-protein] synthase III; COG0332.
 
  
 0.838
HCH_05525
Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit; COG4638.
 
     0.810
HCH_05524
Conserved hypothetical protein.
     
 0.777
HCH_05518
Hypothetical protein.
       0.618
HCH_05517
Hypothetical protein.
       0.546
HCH_02963
Polyketide synthase modules and related protein; COG3321.
   
 
 0.530
HCH_06285
Glutathione S-transferase; COG0625; Belongs to the GST superfamily.
  
 
   0.497
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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