STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_05560Predicted Hydrolase or acyltransferase (alpha/beta hydrolase superfamily); COG0596. (301 aa)    
Predicted Functional Partners:
adhC
Zn-dependent alcohol dehydrogenase, class III; COG1062; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.906
HCH_05054
Alcohol dehydrogenase, class IV; COG1454.
     
 0.901
tadA
Cytosine/adenosine deaminases; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
      0.721
HCH_00776
Rubredoxin; COG1773.
      
 0.665
alkB
Alkane hydroxylase.
      
 0.657
HCH_03447
Polyketide synthase modules and related protein; COG3321.
  
 
 0.601
HCH_04438
Predicted Hydrolase or acyltransferase (alpha/beta hydrolase superfamily); COG0596.
  
     0.592
HCH_00360
Predicted Hydrolase or acyltransferase (alpha/beta hydrolase superfamily); COG0596.
  
     0.588
HCH_02966
Polyketide synthase modules and related protein; COG3321.
   
 
 0.558
HCH_06531
Diadenosine tetraphosphatase and related serine/threonine protein phosphatase; COG0639.
    
  0.549
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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