STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_05783Uncharacterized protein, possibly involved in aromatic compounds catabolism; COG2050. (133 aa)    
Predicted Functional Partners:
HCH_06565
Isochorismate hydrolase; COG1535.
  
 
 0.769
HCH_05784
Conserved hypothetical protein.
     
 0.735
HCH_00999
Transcriptional regulator; COG1309.
 
    0.700
HCH_02961
Non-ribosomal peptide synthetase modules and related protein; COG1020; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.550
HCH_05785
Transcriptional regulator; COG1309.
       0.515
plsX
Fatty acid/phospholipid biosynthesis enzyme; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.469
HCH_00823
Uncharacterized protein, possibly involved in aromatic compounds catabolism; COG2050.
  
     0.430
HCH_05781
Hypothetical protein.
       0.406
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
    0.403
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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